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STRINGSTRING
DM42_5531 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5531" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5531annotation not available (203 aa)    
Predicted Functional Partners:
WL94_32645
annotation not available (244 aa)
   
   
  0.675
DM42_5533
annotation not available (178 aa)
     
      0.484
WL94_28410
annotation not available (517 aa)
   
        0.464
WL94_13925
PTS glucose transporter subunit IIA; PTS_I_fam- phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family (860 aa)
     
 
  0.457
WL94_01305
annotation not available (276 aa)
   
          0.455
DM42_5716
annotation not available (390 aa)
   
          0.454
DM42_365
annotation not available (302 aa)
   
          0.452
WL94_32635
annotation not available (210 aa)
              0.444
DM42_5633
annotation not available (268 aa)
   
          0.438
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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