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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_32525annotation not available (664 aa)    
Predicted Functional Partners:
WL94_32535
annotation not available
 0.994
WL94_32530
annotation not available
 0.982
WL94_32540
acyl-CoA dehydrogenase, N-terminal domain protein
 
 
 0.978
WL94_05365
annotation not available
 0.938
uca
Urea_carbox: urea carboxylase
 
 
0.918
mdcE
Malonate_gamma: malonate decarboxylase, gamma subunit
  
 
 0.839
mdcD
Malonate_beta: malonate decarboxylase, beta subunit
  
 
 0.839
DM42_2069
acyl-CoA dehydrogenase, N-terminal domain protein
  
 
 0.727
acoA
ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
  
  
 0.726
bkdA1
annotation not available
  
  
 0.726
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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