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DM42_5558 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5558" - fkbM_fam: methyltransferase, FkbM family domain protein in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5558fkbM_fam- methyltransferase, FkbM family domain protein (657 aa)    
Predicted Functional Partners:
WL94_32485
Uncharacterized protein (378 aa)
 
          0.869
DM42_5560
Conserved hypothetical protein (155 aa)
 
          0.801
DM42_4653
Conserved hypothetical protein (347 aa)
   
        0.765
DM42_7390
annotation not available (4558 aa)
   
          0.747
DM42_4939
acyl-CoA dehydrogenase, C-terminal domain protein (371 aa)
   
        0.743
DM42_5716
annotation not available (390 aa)
   
          0.721
DM42_979
annotation not available (990 aa)
   
          0.719
WL94_38795
annotation not available (523 aa)
   
          0.719
DM42_4935
annotation not available (341 aa)
   
          0.702
DM42_6544
Conserved hypothetical protein (141 aa)
   
          0.689
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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