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DM42_5574 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5574" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5574Conserved hypothetical protein (452 aa)    
Predicted Functional Partners:
DM42_5575
Conserved hypothetical protein (1125 aa)
 
        0.976
DM42_1755
annotation not available (100 aa)
   
          0.679
DM42_4395
annotation not available (439 aa)
   
          0.624
WL94_27730
Uncharacterized protein (736 aa)
   
          0.620
DM42_2569
Conserved hypothetical protein (214 aa)
   
          0.580
WL94_27345
annotation not available (416 aa)
   
          0.563
DM42_181
annotation not available (585 aa)
   
          0.546
WL94_27895
annotation not available (474 aa)
   
          0.534
DM42_2758
annotation not available (371 aa)
   
          0.528
DM42_6287
GGDEF- diguanylate cyclase domain protein (590 aa)
   
          0.519
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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