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DM42_5575 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5575" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5575Conserved hypothetical protein (1125 aa)    
Predicted Functional Partners:
DM42_5574
Conserved hypothetical protein (452 aa)
 
        0.976
DM42_1755
annotation not available (100 aa)
   
          0.644
DM42_5324
annotation not available (192 aa)
   
          0.560
DM42_4395
annotation not available (439 aa)
   
          0.484
WL94_27730
Uncharacterized protein (736 aa)
   
          0.472
pheT
pheT_bact- phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily (809 aa)
              0.451
WL94_10915
annotation not available (672 aa)
   
          0.449
DM42_2569
Conserved hypothetical protein (214 aa)
   
          0.446
DM42_2758
annotation not available (371 aa)
   
          0.438
WL94_06540
annotation not available (132 aa)
   
          0.428
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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