DM42_5609 protein (Burkholderia cepacia) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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filled nodes:
some 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

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protein homology

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Score

DM42_5609

annotation not available (122 aa)

Predicted Functional Partners:

WL94_25310

0.606

DM42_2654

0.507

DM42_4922

0.502

WL94_02475

0.491

DM42_6785

0.484

DM42_5932

0.468

DM42_2653

0.452

DM42_6039

0.449

DM42_3759

0.449

DM42_4963

0.430

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DM42_2653	DM42_2654	DM42_2653	DM42_2654	annotation not available	Excise- DNA binding , excisionase family domain protein	0.957
DM42_2653	DM42_3759	DM42_2653	DM42_3759	annotation not available	annotation not available	0.598
DM42_2653	DM42_4922	DM42_2653	DM42_4922	annotation not available	annotation not available	0.592
DM42_2653	DM42_5609	DM42_2653	DM42_5609	annotation not available	annotation not available	0.452
DM42_2653	DM42_5932	DM42_2653	DM42_5932	annotation not available	annotation not available	0.634
DM42_2653	DM42_6785	DM42_2653	DM42_6785	annotation not available	annotation not available	0.551
DM42_2654	DM42_2653	DM42_2654	DM42_2653	Excise- DNA binding , excisionase family domain protein	annotation not available	0.957
DM42_2654	DM42_3759	DM42_2654	DM42_3759	Excise- DNA binding , excisionase family domain protein	annotation not available	0.736
DM42_2654	DM42_4922	DM42_2654	DM42_4922	Excise- DNA binding , excisionase family domain protein	annotation not available	0.658
DM42_2654	DM42_4963	DM42_2654	DM42_4963	Excise- DNA binding , excisionase family domain protein	annotation not available	0.492
DM42_2654	DM42_5609	DM42_2654	DM42_5609	Excise- DNA binding , excisionase family domain protein	annotation not available	0.507
DM42_2654	DM42_5932	DM42_2654	DM42_5932	Excise- DNA binding , excisionase family domain protein	annotation not available	0.734
DM42_2654	DM42_6785	DM42_2654	DM42_6785	Excise- DNA binding , excisionase family domain protein	annotation not available	0.671
DM42_2654	WL94_02475	DM42_2654	DM42_5431	Excise- DNA binding , excisionase family domain protein	annotation not available	0.415
DM42_3759	DM42_2653	DM42_3759	DM42_2653	annotation not available	annotation not available	0.598
DM42_3759	DM42_2654	DM42_3759	DM42_2654	annotation not available	Excise- DNA binding , excisionase family domain protein	0.736
DM42_3759	DM42_4922	DM42_3759	DM42_4922	annotation not available	annotation not available	0.794
DM42_3759	DM42_4963	DM42_3759	DM42_4963	annotation not available	annotation not available	0.647
DM42_3759	DM42_5609	DM42_3759	DM42_5609	annotation not available	annotation not available	0.449
DM42_3759	DM42_5932	DM42_3759	DM42_5932	annotation not available	annotation not available	0.765

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