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DM42_5609 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5609" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5609annotation not available (122 aa)    
Predicted Functional Partners:
WL94_25310
Xaa-Pro dipeptidyl-peptidase; /NonD- hydrolase CocE/NonD family protein (656 aa)
 
     
  0.606
DM42_2654
Excise- DNA binding , excisionase family domain protein (137 aa)
   
          0.507
DM42_4922
annotation not available (449 aa)
   
          0.502
WL94_02475
annotation not available (544 aa)
   
          0.491
DM42_6785
annotation not available (373 aa)
   
          0.484
DM42_5932
annotation not available (359 aa)
   
          0.468
DM42_2653
annotation not available (408 aa)
 
          0.452
DM42_6039
annotation not available (113 aa)
   
          0.449
DM42_3759
annotation not available (809 aa)
   
          0.449
DM42_4963
annotation not available (129 aa)
   
          0.430
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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