Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1698 | DM42_4735 | DM42_1698 | DM42_4735 | annotation not available | annotation not available | 0.703 |
DM42_1698 | DM42_6106 | DM42_1698 | DM42_6106 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.703 |
DM42_1698 | betB | DM42_1698 | DM42_5648 | annotation not available | Betaine-aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid | 0.874 |
DM42_1698 | betI | DM42_1698 | DM42_5649 | annotation not available | Tetr/acrr family transcriptional regulator, transcriptional repressor of bet genes; Repressor involved in choline regulation of the bet genes | 0.644 |
DM42_3921 | DM42_4735 | DM42_3921 | DM42_4735 | annotation not available | annotation not available | 0.703 |
DM42_3921 | DM42_6106 | DM42_3921 | DM42_6106 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.703 |
DM42_3921 | betB | DM42_3921 | DM42_5648 | annotation not available | Betaine-aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid | 0.874 |
DM42_3921 | betI | DM42_3921 | DM42_5649 | annotation not available | Tetr/acrr family transcriptional regulator, transcriptional repressor of bet genes; Repressor involved in choline regulation of the bet genes | 0.631 |
DM42_4179 | DM42_4735 | DM42_4179 | DM42_4735 | annotation not available | annotation not available | 0.900 |
DM42_4179 | DM42_6106 | DM42_4179 | DM42_6106 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.900 |
DM42_4179 | betB | DM42_4179 | DM42_5648 | annotation not available | Betaine-aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid | 0.900 |
DM42_4735 | DM42_1698 | DM42_4735 | DM42_1698 | annotation not available | annotation not available | 0.703 |
DM42_4735 | DM42_3921 | DM42_4735 | DM42_3921 | annotation not available | annotation not available | 0.703 |
DM42_4735 | DM42_4179 | DM42_4735 | DM42_4179 | annotation not available | annotation not available | 0.900 |
DM42_4735 | DM42_6106 | DM42_4735 | DM42_6106 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.832 |
DM42_4735 | alkJ | DM42_4735 | DM42_5108 | annotation not available | annotation not available | 0.703 |
DM42_4735 | betA | DM42_4735 | DM42_5647 | annotation not available | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate | 0.706 |
DM42_4735 | betB | DM42_4735 | DM42_5648 | annotation not available | Betaine-aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid | 0.827 |
DM42_6106 | DM42_1698 | DM42_6106 | DM42_1698 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.703 |
DM42_6106 | DM42_3921 | DM42_6106 | DM42_3921 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.703 |
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