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WL94_35605 protein (Burkholderia cepacia) - STRING interaction network
"WL94_35605" - ABC_choline_bnd: choline ABC transporter, periplasmic binding family protein in Burkholderia cepacia
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_35605ABC_choline_bnd- choline ABC transporter, periplasmic binding family protein (322 aa)    
Predicted Functional Partners:
choW
ABC_choXWV_perm- choline ABC transporter, permease protein (298 aa)
 
  0.987
WI67_30070
Glycine betaine/L-proline ABC transporter ATP-binding protein; proV- glycine betaine/L-proline transport ATP binding subunit (389 aa)
 
  0.979
betC
Chol_sulfatase- choline-sulfatase (511 aa)
 
          0.811
betI
HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes (194 aa)
 
     
  0.583
kstD
annotation not available (586 aa)
           
  0.560
WI67_29485
annotation not available (177 aa)
   
          0.534
WL94_35675
annotation not available (261 aa)
 
        0.529
WI67_29390
annotation not available (379 aa)
 
          0.516
WI67_29500
annotation not available (341 aa)
   
          0.497
WI67_30060
annotation not available (332 aa)
   
          0.492
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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