STRINGSTRING
DM42_5771 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5771" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5771annotation not available (503 aa)    
Predicted Functional Partners:
fptA
annotation not available (726 aa)
 
   
  0.967
WL94_38235
MFS transporter; sider_RhtX_FptX- siderophore transporter, RhtX/FptX family protein (415 aa)
 
          0.896
WL94_38265
Oxidoreductase; Thiaz-red- thiazolinyl imide reductase family protein (350 aa)
 
          0.859
DM42_5770
annotation not available (87 aa)
              0.845
DM42_5768
annotation not available (587 aa)
 
          0.799
DM42_5764
AA-adenyl-dom- amino acid adenylation domain protein (1457 aa)
 
        0.763
DM42_4761
Conserved hypothetical protein (247 aa)
   
          0.748
WL94_06130
annotation not available (494 aa)
   
          0.745
DM42_356
Conserved hypothetical protein (465 aa)
   
          0.734
DM42_351
Conserved hypothetical protein (799 aa)
   
          0.731
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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