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DM42_5779 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5779" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5779Conserved hypothetical protein (147 aa)    
Predicted Functional Partners:
DM42_5778
Conserved hypothetical protein (57 aa)
              0.742
DM42_5780
annotation not available (121 aa)
              0.603
DM42_5539
annotation not available (232 aa)
 
          0.527
WL94_38205
annotation not available (209 aa)
              0.514
WL94_17200
annotation not available (211 aa)
 
          0.445
cbiT
cbiT- precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit (420 aa)
              0.445
WI67_15160
annotation not available (205 aa)
 
          0.405
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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