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WL94_38185 protein (Burkholderia cepacia) - STRING interaction network
"WL94_38185" - Vanillate O-demethylase oxidoreductase VanB in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_38185Vanillate O-demethylase oxidoreductase VanB (164 aa)    
Predicted Functional Partners:
WL94_38180
annotation not available (100 aa)
              0.660
DM42_5781
Conserved hypothetical protein (125 aa)
              0.588
WL94_38175
annotation not available (646 aa)
   
        0.541
WL94_19695
annotation not available (369 aa)
 
          0.503
WL94_10950
annotation not available (317 aa)
   
          0.423
DM42_5337
annotation not available (219 aa)
   
          0.415
WI67_31370
Polyketide cyclase (161 aa)
   
          0.407
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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