STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5799annotation not available (568 aa)    
Predicted Functional Partners:
prpC
2-methylcitrate synthase/citrate synthase II family protein; Belongs to the citrate synthase family
  
 0.945
ackA
ackA: acetate kinase
   
 
 0.933
scpC
ygfH_subfam: succinate CoA transferase family protein
   
 0.925
acoD
Acetaldehyde dehydrogenase 2; Belongs to the aldehyde dehydrogenase family
   
 0.922
DM42_900
Enoyl-coa hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family
   
 0.917
DM42_5378
Alcohol dehydrogenase; oxido_YhdH: quinone oxidoreductase, YhdH/YhfP family protein
  
 
 0.913
bkdB
annotation not available
  
 
 0.911
acyP
annotation not available
     
 0.900
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
  
 
 0.867
DM42_5800
Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase; MMSDH: methylmalonate-semialdehyde dehydrogenase
  
 0.865
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (6%) [HD]