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DM42_5811 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5811" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5811annotation not available (188 aa)    
Predicted Functional Partners:
WL94_38030
annotation not available (193 aa)
 
          0.710
WL94_38980
annotation not available (150 aa)
   
          0.601
WI67_02345
annotation not available (115 aa)
   
          0.595
DM42_1597
Near_uncomplex- TIGR04222 domain protein (539 aa)
   
          0.533
DM42_6026
Conserved hypothetical protein (199 aa)
   
          0.520
WI67_03455
Antitoxin; Antitoxin component of a toxin-antitoxin (TA) module (89 aa)
   
          0.505
WL94_11050
annotation not available (372 aa)
   
          0.503
DM42_5809
Mll3908 protein (242 aa)
              0.494
WL94_34755
annotation not available (215 aa)
   
          0.480
WL94_11185
Uncharacterized protein (190 aa)
   
          0.467
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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