STRINGSTRING
WL94_39200 protein (Burkholderia cepacia) - STRING interaction network
"WL94_39200" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_39200annotation not available (388 aa)    
Predicted Functional Partners:
DM42_5876
annotation not available (493 aa)
 
   
  0.765
WL94_39195
annotation not available (487 aa)
 
          0.717
WL94_39190
annotation not available (327 aa)
   
        0.695
DM42_6548
annotation not available (348 aa)
   
 
  0.521
WL94_07515
Adh_fam_2- zinc-binding alcohol dehydrogenase family protein (329 aa)
   
 
  0.521
WI67_24695
annotation not available (342 aa)
   
 
  0.521
WL94_22370
annotation not available (350 aa)
   
 
  0.521
WL94_39185
annotation not available (539 aa)
   
   
  0.493
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (525 aa)
       
 
  0.455
hda
dnaA_homol_Hda- DnaA regulatory inactivator Hda; Belongs to the DnaA family (244 aa)
       
 
  0.445
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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