STRINGSTRING
DM42_5898 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5898" - acCoA-C-Actrans: acetyl-CoA C-acetyltransferase family protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5898acCoA-C-Actrans- acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase family (394 aa)    
Predicted Functional Partners:
WL94_31405
annotation not available (694 aa)
  0.923
WL94_12975
acyl-CoA dehydrogenase, C-terminal domain protein (609 aa)
   
 
  0.921
WL94_25485
annotation not available (708 aa)
  0.918
WI67_22850
ygfH_subfam- succinate CoA transferase family protein (504 aa)
   
 
  0.912
WI67_14555
annotation not available (811 aa)
 
  0.905
WL94_36330
annotation not available (284 aa)
  0.877
WL94_11070
annotation not available (336 aa)
 
  0.875
WL94_05355
annotation not available (518 aa)
  0.858
sucB
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) (425 aa)
   
 
  0.813
prpB
2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate; Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family (297 aa)
   
 
  0.813
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (11%) [HD]