STRINGSTRING
DM42_593 protein (Burkholderia cepacia) - STRING interaction network
"DM42_593" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_593annotation not available (211 aa)    
Predicted Functional Partners:
merR
merR- Hg(II)-responsive transcriptional regulator (135 aa)
 
     
  0.670
DM42_605
annotation not available (116 aa)
 
     
  0.654
DM42_581
Conserved hypothetical protein (166 aa)
 
          0.653
DM42_594
cadR-PbrR- Cd(II)/Pb(II)-responsive transcriptional regulator (132 aa)
 
     
  0.604
merA
merA- mercuric reductase (562 aa)
   
   
  0.602
merP
merP- mercuric transport protein periplasmic component (95 aa)
 
     
  0.595
czcA
annotation not available (1070 aa)
 
   
  0.507
WI67_00720
cadR-PbrR- Cd(II)/Pb(II)-responsive transcriptional regulator (143 aa)
 
     
  0.502
DM42_4609
annotation not available (130 aa)
 
     
  0.495
DM42_4599
cueR- Cu(I)-responsive transcriptional regulator (159 aa)
 
     
  0.472
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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