STRINGSTRING
WL94_38885 protein (Burkholderia cepacia) - STRING interaction network
"WL94_38885" - annotation not available in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_38885annotation not available (548 aa)    
Predicted Functional Partners:
uca
Urea_carbox- urea carboxylase (1206 aa)
   
   
  0.834
DM42_5939
Conserved hypothetical protein (45 aa)
              0.539
WL94_25550
annotation not available (558 aa)
 
 
      0.497
WI67_12615
annotation not available (609 aa)
         
  0.477
WI67_28590
annotation not available (108 aa)
           
  0.475
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (971 aa)
           
  0.474
mgtA
ATPase-IIIB_Mg- magnesium-translocating P-type ATPase (921 aa)
     
 
  0.474
WL94_04070
Uncharacterized protein (256 aa)
   
          0.451
WL94_34680
S-adenosyl-L-methionine-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity (287 aa)
   
          0.420
WI67_24060
annotation not available (557 aa)
   
          0.416
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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