Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_2469 | DM42_5940 | DM42_2469 | DM42_5940 | Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family | annotation not available | 0.423 |
DM42_2551 | DM42_5940 | DM42_2551 | DM42_5940 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.451 |
DM42_2735 | DM42_5940 | DM42_2735 | DM42_5940 | annotation not available | annotation not available | 0.493 |
DM42_5299 | DM42_5940 | DM42_5299 | DM42_5940 | annotation not available | annotation not available | 0.493 |
DM42_5299 | DM42_6127 | DM42_5299 | DM42_6127 | annotation not available | Methyltransferase, family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity | 0.542 |
DM42_5843 | DM42_5940 | DM42_5843 | DM42_5940 | annotation not available | annotation not available | 0.489 |
DM42_5939 | DM42_5940 | DM42_5939 | DM42_5940 | Conserved hypothetical protein | annotation not available | 0.539 |
DM42_5940 | DM42_2469 | DM42_5940 | DM42_2469 | annotation not available | Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family | 0.423 |
DM42_5940 | DM42_2551 | DM42_5940 | DM42_2551 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.451 |
DM42_5940 | DM42_2735 | DM42_5940 | DM42_2735 | annotation not available | annotation not available | 0.493 |
DM42_5940 | DM42_5299 | DM42_5940 | DM42_5299 | annotation not available | annotation not available | 0.493 |
DM42_5940 | DM42_5843 | DM42_5940 | DM42_5843 | annotation not available | annotation not available | 0.489 |
DM42_5940 | DM42_5939 | DM42_5940 | DM42_5939 | annotation not available | Conserved hypothetical protein | 0.539 |
DM42_5940 | DM42_6127 | DM42_5940 | DM42_6127 | annotation not available | Methyltransferase, family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity | 0.420 |
DM42_5940 | hoxN | DM42_5940 | DM42_2539 | annotation not available | Nickel/cobalt transporter (nicot) family protein; Belongs to the NiCoT transporter (TC 2.A.52) family | 0.423 |
DM42_5940 | infB | DM42_5940 | DM42_199 | annotation not available | Translation initiation factor if-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex | 0.485 |
DM42_5940 | uca | DM42_5940 | DM42_6767 | annotation not available | Urea_carbox: urea carboxylase | 0.834 |
DM42_6127 | DM42_5299 | DM42_6127 | DM42_5299 | Methyltransferase, family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity | annotation not available | 0.542 |
DM42_6127 | DM42_5940 | DM42_6127 | DM42_5940 | Methyltransferase, family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity | annotation not available | 0.420 |
hoxN | DM42_5940 | DM42_2539 | DM42_5940 | Nickel/cobalt transporter (nicot) family protein; Belongs to the NiCoT transporter (TC 2.A.52) family | annotation not available | 0.423 |
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