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DM42_5946 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5946" - type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family in Burkholderia cepacia
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
DM42_5946type_III_yscD- type III secretion apparatus protein, YscD/HrpQ family (447 aa)    
Predicted Functional Partners:
DM42_5943
hrcV- type III secretion , HrcV family protein (735 aa)
         
  0.891
DM42_5944
fliQ_rel_III- type III secretion , HrpO family protein (92 aa)
              0.857
DM42_5945
type_III_yscC- type III secretion outer membrane pore, YscC/HrcC family (681 aa)
         
  0.855
DM42_5947
annotation not available (69 aa)
              0.519
WI67_28085
annotation not available (277 aa)
              0.438
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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