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DM42_5968 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5968" - annotation not available in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5968annotation not available (335 aa)    
Predicted Functional Partners:
WL94_38825
galE- UDP-glucose 4-epimerase GalE; Belongs to the NAD(P)-dependent epimerase/dehydratase family (329 aa)
0.988
WL94_38830
UDP-glucose 6-dehydrogenase; NDP-sugDHase- nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (467 aa)
  0.988
WI67_21300
UDP-glucose 6-dehydrogenase; NDP-sugDHase- nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (470 aa)
  0.958
WL94_19895
UDP-glucose 6-dehydrogenase; NDP-sugDHase- nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (466 aa)
  0.957
DM42_7127
annotation not available (348 aa)
   
   
 
0.808
DM42_5965
annotation not available (888 aa)
 
 
  0.758
DM42_7130
annotation not available (307 aa)
 
   
  0.547
DM42_7133
annotation not available (316 aa)
 
 
  0.513
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (348 aa)
 
 
  0.486
DM42_7139
annotation not available (400 aa)
 
   
  0.479
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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