WI67_27970 protein (Burkholderia cepacia) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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gene co-occurrence

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textmining

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protein homology

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Score

WI67_27970

annotation not available (318 aa)

Predicted Functional Partners:

WL94_38750

0.721

DM42_5988

0.529

WL94_38740

0.504

WL94_38735

0.479

DM42_4218

0.468

WL94_02490

0.451

WL94_38730

0.446

WL94_38760

0.442

WL94_38745

0.429

DM42_5053

0.403

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DM42_4218	WI67_27970	DM42_4218	DM42_5982	annotation not available	annotation not available	0.468
DM42_5053	WI67_27970	DM42_5053	DM42_5982	annotation not available	annotation not available	0.403
DM42_5988	WI67_27970	DM42_5988	DM42_5982	annotation not available	annotation not available	0.529
DM42_5988	WL94_38730	DM42_5988	DM42_5987	annotation not available	Uncharacterized protein; FGGY family of carbohydrate kinase, N-terminal domain protein	0.891
DM42_5988	WL94_38735	DM42_5988	DM42_5986	annotation not available	annotation not available	0.873
DM42_5988	WL94_38740	DM42_5988	DM42_5985	annotation not available	annotation not available	0.618
DM42_5988	WL94_38745	DM42_5988	DM42_5984	annotation not available	Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family	0.610
DM42_5988	WL94_38750	DM42_5988	DM42_5983	annotation not available	annotation not available	0.618
WI67_27970	DM42_4218	DM42_5982	DM42_4218	annotation not available	annotation not available	0.468
WI67_27970	DM42_5053	DM42_5982	DM42_5053	annotation not available	annotation not available	0.403
WI67_27970	DM42_5988	DM42_5982	DM42_5988	annotation not available	annotation not available	0.529
WI67_27970	WL94_02490	DM42_5982	DM42_5433	annotation not available	annotation not available	0.451
WI67_27970	WL94_38730	DM42_5982	DM42_5987	annotation not available	Uncharacterized protein; FGGY family of carbohydrate kinase, N-terminal domain protein	0.446
WI67_27970	WL94_38735	DM42_5982	DM42_5986	annotation not available	annotation not available	0.479
WI67_27970	WL94_38740	DM42_5982	DM42_5985	annotation not available	annotation not available	0.504
WI67_27970	WL94_38745	DM42_5982	DM42_5984	annotation not available	Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family	0.429
WI67_27970	WL94_38750	DM42_5982	DM42_5983	annotation not available	annotation not available	0.721
WI67_27970	WL94_38760	DM42_5982	DM42_5981	annotation not available	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid	0.442
WL94_02490	WI67_27970	DM42_5433	DM42_5982	annotation not available	annotation not available	0.451
WL94_38730	DM42_5988	DM42_5987	DM42_5988	Uncharacterized protein; FGGY family of carbohydrate kinase, N-terminal domain protein	annotation not available	0.891

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