STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_38735annotation not available (362 aa)    
Predicted Functional Partners:
polS
annotation not available
 0.941
WL94_08850
annotation not available
    
 0.909
xylA
xylose_isom_A: xylose isomerase; Belongs to the xylose isomerase family
   
 
 0.909
WL94_28020
annotation not available
  
 
 0.908
WL94_30515
annotation not available
  
 
 0.908
WL94_13925
PTS glucose transporter subunit IIA; PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family
    
 0.908
WL94_08785
Carbohydrate kinase
  
 
 0.908
DM42_3683
Glycosyl hydrolases family 32 N-terminal domain protein
     
 0.902
WL94_38730
Uncharacterized protein; FGGY family of carbohydrate kinase, N-terminal domain protein
 
 
 0.879
DM42_5988
annotation not available
 
 0.873
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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