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DM42_6005 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6005" - Transcriptional regulatory , C terminal family protein in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6005Transcriptional regulatory , C terminal family protein (237 aa)    
Predicted Functional Partners:
WL94_38590
annotation not available (483 aa)
  0.995
DM42_6007
annotation not available (464 aa)
 
   
  0.853
WI67_10300
annotation not available (453 aa)
 
  0.762
DM42_65
annotation not available (459 aa)
 
 
  0.748
phoR
PAS domain-containing sensor histidine kinase; phoR_proteo- phosphate regulon sensor kinase PhoR (439 aa)
 
  0.748
DM42_6244
annotation not available (643 aa)
 
 
  0.714
DM42_4823
annotation not available (448 aa)
 
  0.671
DM42_5052
annotation not available (361 aa)
 
  0.660
WL94_38040
Hemolysin secretion protein D; RND_mfp- efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (394 aa)
   
   
  0.655
WL94_15390
annotation not available (448 aa)
 
 
  0.643
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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