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merR protein (Burkholderia cepacia) - STRING interaction network
merR: Hg(II)-responsive transcriptional regulator in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
merRmerR- Hg(II)-responsive transcriptional regulator (135 aa)    
Predicted Functional Partners:
DM42_605
annotation not available (116 aa)
 
   
  0.934
merP
merP- mercuric transport protein periplasmic component (95 aa)
 
   
  0.922
merA
merA- mercuric reductase (562 aa)
 
     
  0.920
DM42_6833
annotation not available (128 aa)
   
          0.690
DM42_593
annotation not available (211 aa)
 
     
  0.670
DM42_3256
annotation not available (153 aa)
   
     
  0.641
DM42_596
lspA- signal peptidase II (166 aa)
 
     
  0.598
DM42_608
annotation not available (172 aa)
 
     
  0.542
pcnB
Poly(A) polymerase I; Adds poly(A) tail to the 3’ end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control (516 aa)
         
  0.499
deoR
annotation not available (256 aa)
           
  0.489
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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