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DM42_6037 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6037" - HAD-SF-IA-v1: HAD hydrolase, IA, variant 1 family protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6037HAD-SF-IA-v1- HAD hydrolase, IA, variant 1 family protein (236 aa)    
Predicted Functional Partners:
WL94_29315
annotation not available (225 aa)
 
 
    0.913
WL94_16440
PGP_bact- phosphoglycolate phosphatase, bacterial (254 aa)
   
   
 
0.852
WI67_05395
HAD-SF-IA-v1- HAD hydrolase, IA, variant 1 family protein (219 aa)
   
   
 
0.840
WL94_38925
annotation not available (207 aa)
         
    0.800
WL94_18410
annotation not available (308 aa)
   
 
    0.663
ghrA
annotation not available (313 aa)
   
 
    0.663
WL94_00935
annotation not available (499 aa)
       
  0.656
WL94_00940
annotation not available (358 aa)
       
  0.656
WI67_03425
annotation not available (362 aa)
       
  0.656
WI67_03430
annotation not available (497 aa)
       
  0.656
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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