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DM42_6065 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6065" - annotation not available in Burkholderia cepacia
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6065annotation not available (159 aa)    
Predicted Functional Partners:
madM
malonate_madM- malonate transporter, MadM subunit (255 aa)
 
        0.801
madL
malonate_madL- malonate transporter, MadL subunit (131 aa)
 
        0.752
mdcA
mdcA- malonate decarboxylase, alpha subunit (548 aa)
 
        0.736
WL94_09610
annotation not available (416 aa)
   
      0.630
DM42_6064
annotation not available (192 aa)
              0.466
WL94_09585
annotation not available (251 aa)
              0.466
mdcB
Probable 2-(5’’-triphosphoribosyl)-3’-dephosphocoenzyme-A synthase; Involved in the formation of 2-(5’’-phosphoribosyl)-3’- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase (288 aa)
 
        0.465
mdcC
Malonate_delta- malonate decarboxylase acyl carrier protein (105 aa)
 
        0.461
mdcD
Malonate_beta- malonate decarboxylase, beta subunit (310 aa)
 
          0.413
mdcE
Malonate_gamma- malonate decarboxylase, gamma subunit (235 aa)
 
        0.400
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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