STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdtNMembrane fusion protein, multidrug efflux system; RND_mfp: efflux transporter, RND family, MFP subunit (349 aa)    
Predicted Functional Partners:
DM42_6086
annotation not available
 
 
 0.975
DM42_6085
Outer membrane efflux family protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin)
 
 
 0.972
DM42_6088
annotation not available
 
     0.964
DM42_4153
Drug resistance mfs transporter, drug:h+ antiporter-2 family protein; Belongs to the major facilitator superfamily
 
 
 
 0.603
DM42_7036
efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 family protein
  
 
 0.553
DM42_3840
Drug resistance mfs transporter, drug:h+ antiporter-2 family protein; Belongs to the major facilitator superfamily
  
 
 0.551
DM42_6189
Drug resistance mfs transporter, drug:h+ antiporter-2 family protein; Belongs to the major facilitator superfamily
  
 
 0.539
DM42_6192
annotation not available
 
 0.504
DM42_5653
Drug resistance mfs transporter, drug:h+ antiporter-2 family protein; Belongs to the major facilitator superfamily
  
 
 0.502
DM42_4297
Drug resistance mfs transporter, drug:h+ antiporter-2 family protein; Belongs to the major facilitator superfamily
 
 
 
 0.500
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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