STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VL15_05360annotation not available (80 aa)    
Predicted Functional Partners:
WL94_38270
Non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein
 
 
 0.999
dltA
Non-ribosomal peptide synthetase; D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1
 
 
 0.924
WL94_28995
Non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein
 
 
 0.921
WL94_28960
annotation not available
 
   
 0.915
WL94_38285
annotation not available
 
  
 0.905
DM42_4965
annotation not available
 
 
 0.893
DM42_5764
AA-adenyl-dom: amino acid adenylation domain protein
 
 
 0.833
rifR
annotation not available
 
  
 0.825
fhuF
Iron reductase; fe_III_red_FhuF: siderophore-iron reductase FhuF
  
  
 0.821
DM42_4961
Thioester-redct: thioester reductase domain protein
 
 
 0.817
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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