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STRINGSTRING
DM42_610 protein (Burkholderia cepacia) - STRING interaction network
"DM42_610" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_610Conserved hypothetical protein (94 aa)    
Predicted Functional Partners:
DM42_609
Conserved hypothetical protein (86 aa)
 
          0.770
DM42_611
Conserved hypothetical protein (309 aa)
 
          0.755
DM42_613
Conserved hypothetical protein (229 aa)
 
          0.666
DM42_602
Conserved hypothetical protein (274 aa)
 
          0.648
DM42_600
Conserved hypothetical protein (245 aa)
   
          0.633
DM42_585
Conserved hypothetical protein (89 aa)
   
          0.631
DM42_616
Conserved hypothetical protein (86 aa)
 
          0.622
DM42_3334
annotation not available (657 aa)
 
          0.615
DM42_615
Conserved hypothetical protein (135 aa)
 
          0.605
DM42_619
Conserved hypothetical protein (106 aa)
 
          0.599
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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