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DM42_6121 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6121" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6121annotation not available (144 aa)    
Predicted Functional Partners:
DM42_261
Conserved hypothetical protein (204 aa)
   
          0.723
WL94_27895
annotation not available (474 aa)
   
          0.711
WL94_12725
annotation not available (487 aa)
   
          0.695
WL94_27970
Uncharacterized protein (235 aa)
   
          0.650
WL94_03900
annotation not available (668 aa)
   
          0.640
WL94_35865
Uncharacterized protein (532 aa)
   
          0.632
DM42_4199
annotation not available (541 aa)
 
          0.619
WI67_27375
annotation not available (202 aa)
   
          0.618
WI67_03305
annotation not available (704 aa)
   
          0.615
WI67_21125
annotation not available (363 aa)
   
     
  0.613
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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