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WL94_04640 protein (Burkholderia cepacia) - STRING interaction network
"WL94_04640" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_04640annotation not available (444 aa)    
Predicted Functional Partners:
WL94_25230
soxA- sarcosine oxidase, alpha subunit; Belongs to the GcvT family (1003 aa)
 
  0.661
WI67_26855
annotation not available (364 aa)
              0.653
WI67_19295
annotation not available (390 aa)
   
          0.594
WL94_18405
annotation not available (286 aa)
 
        0.547
soxD
annotation not available (104 aa)
 
 
      0.546
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine (372 aa)
 
 
  0.541
DM42_6650
annotation not available (478 aa)
 
 
  0.529
DM42_6151
annotation not available (215 aa)
              0.526
WI67_29895
annotation not available (210 aa)
 
 
      0.521
WL94_11090
annotation not available (480 aa)
 
 
  0.487
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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