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DM42_6159 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6159" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6159annotation not available (533 aa)    
Predicted Functional Partners:
DM42_6158
annotation not available (177 aa)
 
          0.938
WI67_23405
annotation not available (246 aa)
 
  0.919
DM42_6157
annotation not available (430 aa)
     
  0.887
WL94_05240
annotation not available (168 aa)
 
          0.703
WI67_25600
annotation not available (425 aa)
     
  0.640
WI67_23415
annotation not available (475 aa)
     
  0.564
WL94_11335
annotation not available (434 aa)
     
  0.498
DM42_7055
annotation not available (527 aa)
     
  0.468
WL94_06300
annotation not available (419 aa)
     
  0.446
iscU
Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (135 aa)
     
        0.431
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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