WL94_05030 protein (Burkholderia cepacia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

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[Homology]

Score

WL94_05030

annotation not available (356 aa)

Predicted Functional Partners:

WL94_05035

0.971

WL94_05020

0.939

WL94_05025

0.938

WL94_05015

0.925

WI67_16220

0.855

WL94_05070

0.827

WL94_04805

0.820

dppD

0.818

gsiD

0.812

oppC

0.807

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WI67_16220	WL94_05015	DM42_1966	DM42_6175	annotation not available	annotation not available	0.738
WI67_16220	WL94_05020	DM42_1966	DM42_6176	annotation not available	annotation not available	0.838
WI67_16220	WL94_05030	DM42_1966	DM42_6178	annotation not available	annotation not available	0.855
WI67_16220	WL94_05035	DM42_1966	DM42_6179	annotation not available	annotation not available	0.661
WI67_16220	WL94_05070	DM42_1966	DM42_6187	annotation not available	annotation not available	0.674
WI67_16220	dppD	DM42_1966	DM42_1967	annotation not available	oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein; Belongs to the ABC transporter superfamily	0.997
WL94_04805	WL94_05015	DM42_7012	DM42_6175	annotation not available	annotation not available	0.775
WL94_04805	WL94_05020	DM42_7012	DM42_6176	annotation not available	annotation not available	0.844
WL94_04805	WL94_05030	DM42_7012	DM42_6178	annotation not available	annotation not available	0.820
WL94_04805	WL94_05035	DM42_7012	DM42_6179	annotation not available	annotation not available	0.612
WL94_04805	WL94_05070	DM42_7012	DM42_6187	annotation not available	annotation not available	0.634
WL94_04805	dppD	DM42_7012	DM42_1967	annotation not available	oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein; Belongs to the ABC transporter superfamily	0.847
WL94_05015	WI67_16220	DM42_6175	DM42_1966	annotation not available	annotation not available	0.738
WL94_05015	WL94_04805	DM42_6175	DM42_7012	annotation not available	annotation not available	0.775
WL94_05015	WL94_05020	DM42_6175	DM42_6176	annotation not available	annotation not available	0.895
WL94_05015	WL94_05025	DM42_6175	DM42_6177	annotation not available	annotation not available	0.974
WL94_05015	WL94_05030	DM42_6175	DM42_6178	annotation not available	annotation not available	0.925
WL94_05015	WL94_05035	DM42_6175	DM42_6179	annotation not available	annotation not available	0.908
WL94_05015	WL94_05070	DM42_6175	DM42_6187	annotation not available	annotation not available	0.768
WL94_05015	gsiD	DM42_6175	DM42_3797	annotation not available	annotation not available	0.719

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