STRINGSTRING
DM42_618 protein (Burkholderia cepacia) - STRING interaction network
"DM42_618" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_618annotation not available (369 aa)    
Predicted Functional Partners:
DM42_617
Conserved hypothetical protein (216 aa)
 
          0.944
DM42_619
Conserved hypothetical protein (106 aa)
 
          0.936
DM42_622
SNF2 family N-terminal domain protein (759 aa)
 
     
  0.899
DM42_620
Conserved hypothetical protein (101 aa)
 
          0.897
DM42_616
Conserved hypothetical protein (86 aa)
 
          0.892
DM42_615
Conserved hypothetical protein (135 aa)
 
          0.892
DM42_613
Conserved hypothetical protein (229 aa)
 
          0.869
DM42_614
Conserved hypothetical protein (113 aa)
 
          0.848
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (917 aa)
   
   
  0.840
DM42_611
Conserved hypothetical protein (309 aa)
 
          0.838
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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