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STRINGSTRING
DM42_6183 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6183" - couple_hipA: HipA N-terminal domain protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6183couple_hipA- HipA N-terminal domain protein (444 aa)    
Predicted Functional Partners:
DM42_6182
annotation not available (82 aa)
 
 
 
  0.968
DM42_6995
annotation not available (94 aa)
 
 
 
  0.653
WL94_29700
annotation not available (191 aa)
 
 
 
  0.536
WI67_31760
annotation not available (192 aa)
 
 
 
  0.532
WI67_13125
annotation not available (269 aa)
 
 
 
  0.527
DM42_4811
annotation not available (528 aa)
 
   
  0.472
WL94_05045
annotation not available (297 aa)
 
          0.464
WI67_14410
annotation not available (229 aa)
     
 
  0.462
WI67_28285
annotation not available (185 aa)
     
 
  0.462
WI67_31930
annotation not available (180 aa)
     
 
  0.462
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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