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DM42_6190 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6190" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6190annotation not available (300 aa)    
Predicted Functional Partners:
WL94_08510
annotation not available (315 aa)
   
          0.711
DM42_6536
annotation not available (323 aa)
   
          0.609
DM42_6192
annotation not available (683 aa)
              0.565
DM42_6456
annotation not available (315 aa)
   
          0.545
WL94_06535
annotation not available (314 aa)
   
          0.515
WL94_32030
phn_lysR- aminoethylphosphonate catabolism associated LysR transcriptional regulator family protein (311 aa)
   
          0.512
DM42_6674
annotation not available (292 aa)
   
          0.487
WL94_18090
annotation not available (297 aa)
   
        0.437
DM42_5733
annotation not available (295 aa)
   
          0.437
DM42_6291
annotation not available (298 aa)
   
          0.432
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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