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DM42_6192 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6192" - annotation not available in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6192annotation not available (683 aa)    
Predicted Functional Partners:
VL15_06440
HlyD family secretion protein; RND_mfp- efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (291 aa)
 
  0.796
WL94_34005
Uncharacterized protein; RND_mfp- efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (325 aa)
 
  0.729
DM42_6190
annotation not available (300 aa)
              0.565
DM42_4364
Conserved hypothetical protein (382 aa)
   
          0.501
WI67_27345
RND_mfp- efflux transporter, RND family, MFP subunit (349 aa)
 
  0.483
DM42_5064
Conserved hypothetical protein (332 aa)
   
          0.483
DM42_3426
annotation not available (321 aa)
   
          0.464
DM42_3433
papC N-terminal domain protein (816 aa)
   
          0.462
DM42_3435
Conserved hypothetical protein (226 aa)
   
          0.459
DM42_7421
annotation not available (107 aa)
 
 
      0.441
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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