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DM42_6200 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6200" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6200Conserved hypothetical protein (77 aa)    
Predicted Functional Partners:
WL94_05155
annotation not available (360 aa)
              0.710
DM42_70
annotation not available (341 aa)
   
          0.640
WL94_38880
annotation not available (302 aa)
   
          0.627
DM42_3748
annotation not available (414 aa)
   
          0.624
WL94_12725
annotation not available (487 aa)
   
          0.608
WL94_05145
annotation not available (147 aa)
              0.600
WI67_31700
annotation not available (531 aa)
   
          0.595
DM42_5239
annotation not available (141 aa)
   
          0.576
WL94_12305
annotation not available (403 aa)
   
          0.546
WL94_31425
annotation not available (713 aa)
   
          0.545
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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