STRINGSTRING
DM42_6233 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6233" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6233annotation not available (356 aa)    
Predicted Functional Partners:
DM42_6234
annotation not available (340 aa)
 
          0.887
DM42_6235
annotation not available (285 aa)
              0.846
DM42_6232
dctM- TRAP transporter, DctM subunit (626 aa)
 
     
  0.835
DM42_6231
TAT_signal_seq- Tat (twin-arginine translocation) pathway signal sequence domain protein (343 aa)
 
          0.810
DM42_7030
deoR C terminal sensor domain protein (272 aa)
   
 
 
  0.685
deoR
annotation not available (256 aa)
   
 
 
  0.662
WI67_18675
annotation not available (255 aa)
   
 
 
  0.587
WL94_15815
annotation not available (1567 aa)
       
 
  0.512
WI67_04485
DeoR family transcriptional regulator; deoR C terminal sensor domain protein (251 aa)
   
 
 
  0.484
WI67_30460
AraC family transcriptional regulator; deoR C terminal sensor domain protein (252 aa)
   
 
 
  0.482
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (13%) [HD]