Genes that are sometimes fused into single open reading frames.
loading ...
currently showing
Databases
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
loading ...
currently showing
Coexpression
Proteins whose genes are observed to be correlated in expression, across a large number of experiments.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_05405
annotation not available (404 aa)
Predicted Functional Partners:
DM42_6248
Conserved hypothetical protein
0.758
DM42_6816
annotation not available
0.528
DM42_6246
annotation not available
0.514
DM42_7390
annotation not available
0.450
DM42_7367
annotation not available
0.443
DM42_3568
annotation not available
0.430
DM42_4544
Conserved hypothetical protein
0.426
DM42_6817
annotation not available
0.415
DM42_5853
T1SS_VCA0849: type I secretion C-terminal target domain protein