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DM42_6276 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6276" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6276Conserved hypothetical protein (144 aa)    
Predicted Functional Partners:
WL94_05505
annotation not available (304 aa)
              0.604
WL94_11010
annotation not available (492 aa)
   
          0.576
DM42_6017
Conserved hypothetical protein (231 aa)
   
          0.535
WL94_11005
acyl-CoA dehydrogenase, C-terminal domain protein (397 aa)
   
          0.450
WL94_11000
annotation not available (125 aa)
   
          0.447
WL94_11020
annotation not available (167 aa)
   
          0.439
WL94_05500
Uncharacterized protein (145 aa)
              0.437
WL94_05495
annotation not available (258 aa)
              0.437
WL94_11050
annotation not available (372 aa)
   
          0.427
DM42_4448
annotation not available (173 aa)
   
          0.422
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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