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DM42_6286 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6286" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6286annotation not available (376 aa)    
Predicted Functional Partners:
DM42_6287
GGDEF- diguanylate cyclase domain protein (590 aa)
 
     
  0.956
WL94_12815
annotation not available (279 aa)
   
  0.813
WI67_09335
annotation not available (273 aa)
   
  0.812
WL94_29925
annotation not available (308 aa)
   
  0.769
WI67_18605
annotation not available (328 aa)
   
  0.768
WI67_20335
annotation not available (330 aa)
   
  0.765
WI67_21780
annotation not available (278 aa)
   
  0.729
WI67_20330
annotation not available (264 aa)
   
  0.716
WL94_26495
annotation not available (418 aa)
 
   
  0.679
phnV
phnV- 2-aminoethylphosphonate ABC transport system, membrane component PhnV (286 aa)
 
   
  0.664
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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