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DM42_6298 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6298" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6298Conserved hypothetical protein (139 aa)    
Predicted Functional Partners:
DM42_6299
annotation not available (167 aa)
 
          0.969
WL94_05630
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (261 aa)
 
          0.944
WL94_05650
Uncharacterized protein (464 aa)
 
          0.763
WL94_05655
Uncharacterized protein (385 aa)
 
          0.752
DM42_6296
annotation not available (37 aa)
              0.700
WL94_05625
annotation not available (99 aa)
 
          0.660
DM42_2695
annotation not available (98 aa)
    
          0.647
DM42_3426
annotation not available (321 aa)
    
          0.582
DM42_6824
annotation not available (429 aa)
    
          0.560
WL94_20340
annotation not available (269 aa)
    
          0.555
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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