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DM42_6393 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6393" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6393annotation not available (465 aa)    
Predicted Functional Partners:
DM42_6394
annotation not available (267 aa)
 
   
  0.957
DM42_6391
acyl-CoA dehydrogenase, N-terminal domain protein (387 aa)
 
        0.951
WL94_33985
Acyl-CoA dehydrogenase; N-terminal half of MaoC dehydratase family protein (286 aa)
 
        0.919
DM42_6392
annotation not available (392 aa)
 
        0.911
DM42_6089
annotation not available (300 aa)
 
          0.563
WI67_11925
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (507 aa)
         
  0.488
DM42_6395
annotation not available (470 aa)
              0.484
DM42_6408
annotation not available (295 aa)
 
   
  0.478
WL94_10590
annotation not available (1212 aa)
              0.469
WL94_29135
acyl-CoA dehydrogenase, N-terminal domain protein (388 aa)
 
        0.460
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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