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STRINGSTRING
eutD protein (Burkholderia cepacia) - STRING interaction network
"eutD" - ectoine_eutD: ectoine utilization protein EutD in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eutDectoine_eutD- ectoine utilization protein EutD (402 aa)    
Predicted Functional Partners:
eutE
ectoine_eutE- ectoine utilization protein EutE (341 aa)
 
   
  0.996
eutC
ectoine_eutC- ectoine utilization protein EutC (334 aa)
 
     
  0.957
eutB
ectoine_eutB- ectoine utilization protein EutB (323 aa)
 
   
  0.901
DM42_6400
annotation not available (156 aa)
 
 
 
  0.897
DM42_6395
annotation not available (470 aa)
 
        0.848
DM42_6402
annotation not available (464 aa)
 
     
  0.808
WL94_06275
annotation not available (343 aa)
 
     
  0.654
DM42_6401
annotation not available (492 aa)
 
 
  0.628
WL94_15815
annotation not available (1567 aa)
         
  0.515
DM42_6771
annotation not available (245 aa)
 
          0.438
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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