STRINGSTRING
DM42_6408 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6408" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6408annotation not available (295 aa)    
Predicted Functional Partners:
DM42_6407
annotation not available (296 aa)
 
          0.865
WL94_00340
cit_synth_II- 2-methylcitrate synthase/citrate synthase II family protein; Belongs to the citrate synthase family (390 aa)
   
  0.837
prpD
prpD- 2-methylcitrate dehydratase (483 aa)
 
   
  0.798
DM42_6409
annotation not available (442 aa)
   
        0.656
prpF
3-methylitaconate isomerase; prpF- putative AcnD-accessory protein PrpF (396 aa)
 
   
  0.638
DM42_6406
annotation not available (423 aa)
              0.620
DM42_6943
annotation not available (390 aa)
 
   
  0.598
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily (724 aa)
   
   
  0.548
aceB
malate_syn_A- malate synthase A; Belongs to the malate synthase family (530 aa)
   
   
  0.543
acnD
2met_isocit_dHY- 2-methylisocitrate dehydratase, Fe/S-dependent (864 aa)
 
 
  0.486
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (14%) [HD]