STRINGSTRING
DM42_6424 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6424" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6424annotation not available (99 aa)    
Predicted Functional Partners:
WI67_11570
annotation not available (838 aa)
   
          0.714
WI67_14170
Uncharacterized protein (195 aa)
   
          0.684
DM42_2954
Phasin (PHA-granule associated protein); Phasin- phasin family domain protein (188 aa)
   
          0.679
WI67_21510
annotation not available (269 aa)
   
          0.638
WL94_18240
UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate (1964 aa)
   
          0.608
WL94_14180
Phasin- phasin family domain protein (194 aa)
   
          0.604
DM42_6426
annotation not available (507 aa)
     
      0.603
WI67_05165
annotation not available (155 aa)
   
          0.567
WI67_04540
annotation not available (375 aa)
   
          0.553
WI67_11640
annotation not available (275 aa)
   
          0.553
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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