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STRINGSTRING
DM42_6431 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6431" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6431annotation not available (376 aa)    
Predicted Functional Partners:
DM42_6432
annotation not available (387 aa)
 
       
0.822
DM42_6433
HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein (507 aa)
              0.700
DM42_6434
annotation not available (279 aa)
              0.572
WL94_15815
annotation not available (1567 aa)
         
  0.515
hisS
hisS- histidine--tRNA ligase (446 aa)
 
   
  0.503
DM42_6430
diampropi_NH3ly- diaminopropionate ammonia-lyase family protein (411 aa)
   
   
  0.498
DM42_6435
annotation not available (160 aa)
     
      0.442
DM42_6429
Amidohydrolases- amidohydrolase family protein (386 aa)
   
        0.431
DM42_6428
annotation not available (472 aa)
   
 
  0.424
eutE
ectoine_eutE- ectoine utilization protein EutE (341 aa)
 
     
  0.418
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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