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DM42_6444 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6444" - HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein in Burkholderia cepacia
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6444HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein (368 aa)    
Predicted Functional Partners:
DM42_6445
annotation not available (241 aa)
 
  0.992
DM42_6443
HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein (382 aa)
 
   
0.985
DM42_6441
annotation not available (182 aa)
 
 
  0.982
DM42_6442
annotation not available (405 aa)
 
 
  0.978
WL94_08490
annotation not available (240 aa)
 
 
  0.779
WL94_11700
annotation not available (251 aa)
 
 
  0.757
artP
annotation not available (241 aa)
 
 
  0.754
DM42_4697
annotation not available (256 aa)
 
 
  0.733
DM42_7263
annotation not available (249 aa)
 
 
  0.675
WL94_22185
annotation not available (252 aa)
 
 
  0.623
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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