STRINGSTRING
DM42_647 protein (Burkholderia cepacia) - STRING interaction network
"DM42_647" - annotation not available in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_647annotation not available (164 aa)    
Predicted Functional Partners:
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (373 aa)
         
  0.707
DM42_648
Conserved hypothetical protein (148 aa)
 
          0.683
DM42_643
Conserved hypothetical protein (476 aa)
 
     
  0.682
DM42_645
Conjugative transfer ATPase, PFL_4706 family; traC_PFL_4706- conjugative transfer ATPase, PFL_4706 family (960 aa)
 
     
  0.681
DM42_649
annotation not available (308 aa)
 
          0.674
DM42_640
Conserved hypothetical protein (136 aa)
 
          0.667
DM42_642
Conserved hypothetical protein (305 aa)
 
          0.665
DM42_644
Conserved hypothetical protein (146 aa)
 
          0.661
DM42_641
Conserved hypothetical protein (229 aa)
 
          0.660
DM42_639
Conserved hypothetical protein (119 aa)
 
          0.651
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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