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DM42_6546 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6546" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6546annotation not available (284 aa)    
Predicted Functional Partners:
DM42_6547
Conserved hypothetical protein (239 aa)
 
          0.877
DM42_6549
Conserved hypothetical protein (239 aa)
 
          0.868
DM42_6548
annotation not available (348 aa)
 
          0.664
DM42_6550
annotation not available (284 aa)
 
       
0.624
DM42_6552
annotation not available (273 aa)
 
          0.574
DM42_6551
Adh_fam_1- zinc-binding alcohol dehydrogenase family protein (335 aa)
        0.565
DM42_6545
annotation not available (122 aa)
              0.563
WL94_19720
Multifunctional fusion protein; Catalyzes the synthesis of activated sulfate; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily (632 aa)
   
   
  0.493
DM42_1043
apsK- adenylylsulfate kinase (169 aa)
     
   
  0.461
DM42_6544
Conserved hypothetical protein (141 aa)
 
          0.460
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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